IL_4E8V_009

3D structure

PDB id

4E8V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of K+ and Ba2+

Experimental method

X-RAY DIFFRACTION

Resolution

3.99 Å

Loop

Sequence

AAUG*CUUUCUGCCAAAGUU

Length

19 nucleotides

Bulged bases

4E8V|1|A|A|207

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4E8V|1|A|A|166
4E8V|1|A|A|167
4E8V|1|A|U|168
4E8V|1|A|G|169
*
4E8V|1|A|C|197
4E8V|1|A|U|198
4E8V|1|A|U|199
4E8V|1|A|U|200
4E8V|1|A|C|201
4E8V|1|A|U|202
4E8V|1|A|G|203
4E8V|1|A|C|204
4E8V|1|A|C|205
4E8V|1|A|A|206
4E8V|1|A|A|207
4E8V|1|A|A|208
4E8V|1|A|G|209
4E8V|1|A|U|210
4E8V|1|A|U|211

Current chains

Chain A

Group IIC intron

Nearby chains