IL_4E8V_019

3D structure

PDB id

4E8V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of K+ and Ba2+

Experimental method

X-RAY DIFFRACTION

Resolution

3.99 Å

Loop

Sequence

AUAUGAGGCUAGGUAUCA*UGGUACAGAGUAAAU

Length

33 nucleotides

Bulged bases

4E8V|1|A|U|152, 4E8V|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4E8V|1|A|A|149
4E8V|1|A|U|150
4E8V|1|A|A|151
4E8V|1|A|U|152
4E8V|1|A|G|153
4E8V|1|A|A|154
4E8V|1|A|G|155
4E8V|1|A|G|156
4E8V|1|A|C|157
4E8V|1|A|U|158
4E8V|1|A|A|159
4E8V|1|A|G|160
4E8V|1|A|G|161
4E8V|1|A|U|162
4E8V|1|A|A|163
4E8V|1|A|U|164
4E8V|1|A|C|165
4E8V|1|A|A|166
*
4E8V|1|A|U|211
4E8V|1|A|G|212
4E8V|1|A|G|213
4E8V|1|A|U|214
4E8V|1|A|A|215
4E8V|1|A|C|216
4E8V|1|A|A|217
4E8V|1|A|G|218
4E8V|1|A|A|219
4E8V|1|A|G|220
4E8V|1|A|U|221
4E8V|1|A|A|222
4E8V|1|A|A|223
4E8V|1|A|A|224
4E8V|1|A|U|225

Current chains

Chain A

Group IIC intron

Nearby chains