IL_4FWT_001

3D structure

PDB id

4FWT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex structure of viral RNA polymerase form III

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CUAC*GUAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_68658.1

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

116

Unit IDs

4FWT|1|G|C|2003
4FWT|1|G|U|2004
4FWT|1|G|A|2005
4FWT|1|G|C|2006
*
4FWT|1|T|G|2103
4FWT|1|T|U|2104
4FWT|1|T|A|2105
4FWT|1|T|G|2106

Current chains

Chain G

RNA (5'-R(*C*CP*CP*UP*AP*CP*CP*C)-3')

Chain T

RNA (5'-R(*GP*GP*GP*UP*AP*GP*GP*G)-3')

Nearby chains

Chain A

Elongation factor Ts, Elongation factor Tu, LINKER, Q beta replicase