3D structure

PDB id
4IOA (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of compound 4e bound to large ribosomal subunit (50S) from Deinococcus radiodurans
Experimental method
X-RAY DIFFRACTION
Resolution
3.2 Å

Loop

Sequence
UAC*GACG
Length
7 nucleotides
Bulged bases
4IOA|1|X|C|1575
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_01312.9
Basepair signature
cWW-cWW-cWW
Number of instances in this motif group
279

Unit IDs

4IOA|1|X|U|1447
4IOA|1|X|A|1448
4IOA|1|X|C|1449
*
4IOA|1|X|G|1573
4IOA|1|X|A|1574
4IOA|1|X|C|1575
4IOA|1|X|G|1576

Current chains

Chain X
23S ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:

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