IL_4J5V_003

3D structure

PDB id

4J5V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of p19 in complex with double-helical RNA 19mer p(CAG)3C(CCG)3

Experimental method

X-RAY DIFFRACTION

Resolution

2.15 Å

Loop

Sequence

CAG*CCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_92602.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

321

Unit IDs

4J5V|1|B|C|207
4J5V|1|B|A|208
4J5V|1|B|G|209
*
4J5V|1|B|C|211||||4_555
4J5V|1|B|C|212||||4_555
4J5V|1|B|G|213||||4_555

Current chains

Chain B

5'-R(P*CP*AP*GP*CP*AP*GP*CP*AP*GP*CP*CP*CP*GP*CP*CP*GP*CP*CP*G)-3'

Nearby chains

Chain A

RNA silencing suppressor p19