IL_4JI4_034
3D structure
- PDB id
- 4JI4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.69 Å
Loop
- Sequence
- GGAAUU*AGGAAC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4JI4_034 not in the Motif Atlas
- Homologous match to IL_4LFB_030
- Geometric discrepancy: 0.069
- The information below is about IL_4LFB_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04668.2
- Basepair signature
- cWW-cWW-cWW-L-R-L-R-cWW
- Number of instances in this motif group
- 8
Unit IDs
4JI4|1|A|G|673
4JI4|1|A|G|674
4JI4|1|A|A|675
4JI4|1|A|A|676
4JI4|1|A|U|677
4JI4|1|A|U|678
*
4JI4|1|A|A|712
4JI4|1|A|G|713
4JI4|1|A|G|714
4JI4|1|A|A|715
4JI4|1|A|A|716
4JI4|1|A|C|717
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain F
- RIBOSOMAL PROTEIN S6
- Chain K
- RIBOSOMAL PROTEIN S11
- Chain R
- RIBOSOMAL PROTEIN S18
Coloring options: