IL_4JI5_071

3D structure

PDB id

4JI5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of 30S ribosomal subunit from Thermus thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.85 Å

Loop

Sequence

GAGAGG*CUGGU

Length

11 nucleotides

Bulged bases

4JI5|1|A|A|665

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4JI5|1|A|G|662
4JI5|1|A|A|663
4JI5|1|A|G|664
4JI5|1|A|A|665
4JI5|1|A|G|666
4JI5|1|A|G|667
*
4JI5|1|A|C|739
4JI5|1|A|U|740
4JI5|1|A|G|741
4JI5|1|A|G|742
4JI5|1|A|U|743

Current chains

Chain A

16S rRNA

Nearby chains

Chain F

RIBOSOMAL PROTEIN S6

Chain O

RIBOSOMAL PROTEIN S15

Chain R

RIBOSOMAL PROTEIN S18