IL_4JI6_063
3D structure
- PDB id
- 4JI6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.55 Å
Loop
- Sequence
- GAGAGG*CUGGU
- Length
- 11 nucleotides
- Bulged bases
- 4JI6|1|A|A|665
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4JI6_063 not in the Motif Atlas
- Geometric match to IL_9JA9_001
- Geometric discrepancy: 0.3836
- The information below is about IL_9JA9_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_71154.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 17
Unit IDs
4JI6|1|A|G|662
4JI6|1|A|A|663
4JI6|1|A|G|664
4JI6|1|A|A|665
4JI6|1|A|G|666
4JI6|1|A|G|667
*
4JI6|1|A|C|739
4JI6|1|A|U|740
4JI6|1|A|G|741
4JI6|1|A|G|742
4JI6|1|A|U|743
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain F
- RIBOSOMAL PROTEIN S6
- Chain O
- RIBOSOMAL PROTEIN S15
- Chain R
- RIBOSOMAL PROTEIN S18
Coloring options: