IL_4JV5_041
3D structure
- PDB id
- 4JV5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structures of pseudouridinilated stop codons with ASLs
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.16 Å
Loop
- Sequence
- UAG*UA
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4JV5_041 not in the Motif Atlas
- Homologous match to IL_5J7L_044
- Geometric discrepancy: 0.4818
- The information below is about IL_5J7L_044
- Detailed Annotation
- Single stack bend
- Broad Annotation
- No text annotation
- Motif group
- IL_26793.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 16
Unit IDs
4JV5|1|A|U|1000
4JV5|1|A|A|1001
4JV5|1|A|G|1001|||A
*
4JV5|1|A|U|1040
4JV5|1|A|A|1041
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: