IL_4JV5_055
3D structure
- PDB id
- 4JV5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structures of pseudouridinilated stop codons with ASLs
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.16 Å
Loop
- Sequence
- AUC*GGU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4JV5_055 not in the Motif Atlas
- Geometric match to IL_4P3U_012
- Geometric discrepancy: 0.2614
- The information below is about IL_4P3U_012
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
4JV5|1|A|A|1350
4JV5|1|A|U|1351
4JV5|1|A|C|1352
*
4JV5|1|A|G|1370
4JV5|1|A|G|1371
4JV5|1|A|U|1372
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain G
- 30S ribosomal protein S7
- Chain I
- 30S ribosomal protein S9
- Chain N
- 30S ribosomal protein S14
- Chain U
- 30S ribosomal protein THX
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