IL_4JV5_070
3D structure
- PDB id
- 4JV5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structures of pseudouridinilated stop codons with ASLs
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.16 Å
Loop
- Sequence
- GUUGC*GGCACUC
- Length
- 12 nucleotides
- Bulged bases
- 4JV5|1|A|U|1125, 4JV5|1|A|U|1126
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4JV5_070 not in the Motif Atlas
- Homologous match to IL_4LFB_048
- Geometric discrepancy: 0.2363
- The information below is about IL_4LFB_048
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_85222.1
- Basepair signature
- cWW-L-R-L-R-L-cWW-L-L
- Number of instances in this motif group
- 1
Unit IDs
4JV5|1|A|G|1124
4JV5|1|A|U|1125
4JV5|1|A|U|1126
4JV5|1|A|G|1127
4JV5|1|A|C|1128
*
4JV5|1|A|G|1143
4JV5|1|A|G|1144
4JV5|1|A|C|1145
4JV5|1|A|A|1146
4JV5|1|A|C|1147
4JV5|1|A|U|1148
4JV5|1|A|C|1149
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain I
- 30S ribosomal protein S9
- Chain J
- 30S ribosomal protein S10
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