IL_4JYA_027
3D structure
- PDB id
- 4JYA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structures of pseudouridinilated stop codons with ASLs
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- UGAAAGAC*GGGGAG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4JYA_027 not in the Motif Atlas
- Homologous match to IL_4LFB_026
- Geometric discrepancy: 0.1093
- The information below is about IL_4LFB_026
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04211.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
4JYA|1|A|U|589
4JYA|1|A|G|590
4JYA|1|A|A|591
4JYA|1|A|A|592
4JYA|1|A|A|593
4JYA|1|A|G|594
4JYA|1|A|A|595
4JYA|1|A|C|596
*
4JYA|1|A|G|612
4JYA|1|A|G|613
4JYA|1|A|G|614
4JYA|1|A|G|615
4JYA|1|A|A|616
4JYA|1|A|G|617
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain D
- 30S ribosomal protein S4
- Chain H
- 30S ribosomal protein S8
- Chain P
- 30S ribosomal protein S16
Coloring options: