IL_4KHP_010
3D structure
- PDB id
- 4KHP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Thermus thermophilus 30S ribosomal subunit in complex with de-6-MSA-pactamycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GACAAC*GCUAAUC
- Length
- 13 nucleotides
- Bulged bases
- 4KHP|1|A|U|168
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4KHP_010 not in the Motif Atlas
- Homologous match to IL_4LFB_009
- Geometric discrepancy: 0.0693
- The information below is about IL_4LFB_009
- Detailed Annotation
- tWH-tWH-tHW-tHW
- Broad Annotation
- No text annotation
- Motif group
- IL_12745.1
- Basepair signature
- cWW-tWH-tWH-tHW-tHW-cWW
- Number of instances in this motif group
- 1
Unit IDs
4KHP|1|A|G|143
4KHP|1|A|A|144
4KHP|1|A|C|145
4KHP|1|A|A|146
4KHP|1|A|A|147
4KHP|1|A|C|148
*
4KHP|1|A|G|163
4KHP|1|A|C|164
4KHP|1|A|U|165
4KHP|1|A|A|166
4KHP|1|A|A|167
4KHP|1|A|U|168
4KHP|1|A|C|169
Current chains
- Chain A
- 16S Ribosomal RNA
Nearby chains
- Chain T
- 30S Ribosomal protein S20
Coloring options: