IL_4KHP_032
3D structure
- PDB id
- 4KHP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Thermus thermophilus 30S ribosomal subunit in complex with de-6-MSA-pactamycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GAGUAG*CGCAGAUAC
- Length
- 15 nucleotides
- Bulged bases
- 4KHP|1|A|A|686
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4KHP_032 not in the Motif Atlas
- Homologous match to IL_4LFB_031
- Geometric discrepancy: 0.0635
- The information below is about IL_4LFB_031
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_95727.1
- Basepair signature
- cWW-L-tSH-L-tHW-tHS-R-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
4KHP|1|A|G|667
4KHP|1|A|A|668
4KHP|1|A|G|669
4KHP|1|A|U|670
4KHP|1|A|A|671
4KHP|1|A|G|672
*
4KHP|1|A|C|683
4KHP|1|A|G|684
4KHP|1|A|C|685
4KHP|1|A|A|686
4KHP|1|A|G|687
4KHP|1|A|A|688
4KHP|1|A|U|689
4KHP|1|A|A|690
4KHP|1|A|C|691
Current chains
- Chain A
- 16S Ribosomal RNA
Nearby chains
- Chain K
- 30S Ribosomal protein S11
Coloring options: