IL_4KTG_005

3D structure

PDB id

4KTG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of double-helical GGC-repetitive RNA 19mer complexed with RSS p19

Experimental method

X-RAY DIFFRACTION

Resolution

1.92 Å

Loop

Sequence

GGC*GGC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_85638.1

Basepair signature

cWW-cWH-cWW

Number of instances in this motif group

43

Unit IDs

4KTG|1|B|G|215
4KTG|1|B|G|216
4KTG|1|B|C|217
*
4KTG|1|E|G|203
4KTG|1|E|G|204
4KTG|1|E|C|205

Current chains

Chain B

5'-R(P*GP*CP*GP*GP*CP*GP*GP*CP*GP*GP*CP*GP*GP*CP*GP*GP*CP*GP*C)-3'

Chain E

5'-R(P*GP*CP*GP*GP*CP*GP*GP*CP*GP*GP*CP*GP*GP*CP*GP*GP*CP*GP*C)-3'

Nearby chains

Chain A

RNA silencing suppressor p19