IL_4KVB_051
3D structure
- PDB id
- 4KVB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermus thermophilus HB27 30S ribosomal subunit lacking ribosomal protein S17
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4.2 Å
Loop
- Sequence
- GAUG*CUAAUC
- Length
- 10 nucleotides
- Bulged bases
- 4KVB|1|A|U|1257, 4KVB|1|A|U|1278, 4KVB|1|A|A|1280, 4KVB|1|A|U|1281
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4KVB_051 not in the Motif Atlas
- Homologous match to IL_4LFB_052
- Geometric discrepancy: 0.1812
- The information below is about IL_4LFB_052
- Detailed Annotation
- 180 degree turn
- Broad Annotation
- No text annotation
- Motif group
- IL_08849.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
4KVB|1|A|G|1255
4KVB|1|A|A|1256
4KVB|1|A|U|1257
4KVB|1|A|G|1258
*
4KVB|1|A|C|1277
4KVB|1|A|U|1278
4KVB|1|A|A|1279
4KVB|1|A|A|1280
4KVB|1|A|U|1281
4KVB|1|A|C|1282
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain C
- 30S ribosomal protein S3
- Chain I
- 30S ribosomal protein S9
- Chain J
- 30S ribosomal protein S10
- Chain N
- 30S ribosomal protein S14 type Z
Coloring options: