3D structure

PDB id
4KZX (explore in PDB, NAKB, or RNA 3D Hub)
Description
Rabbit 40S ribosomal subunit in complex with eIF1.
Experimental method
X-RAY DIFFRACTION
Resolution
7.81 Å

Loop

Sequence
GGG*CGAUUC
Length
9 nucleotides
Bulged bases
4KZX|1|i|U|418
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4KZX_024 not in the Motif Atlas
Homologous match to IL_4V88_404
Geometric discrepancy: 0.169
The information below is about IL_4V88_404
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_11347.3
Basepair signature
cWW-L-R-L-cWW-L
Number of instances in this motif group
2

Unit IDs

4KZX|1|i|G|401
4KZX|1|i|G|402
4KZX|1|i|G|403
*
4KZX|1|i|C|414
4KZX|1|i|G|415
4KZX|1|i|A|416
4KZX|1|i|U|417
4KZX|1|i|U|418
4KZX|1|i|C|419

Current chains

Chain i
18S ribosomal RNA

Nearby chains

Chain E
40S ribosomal protein S4X
Chain J
40S Ribosomal protein S9
Chain X
40S ribosomal protein S23

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.0651 s