IL_4KZX_030

3D structure

PDB id

4KZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 40S ribosomal subunit in complex with eIF1.

Experimental method

X-RAY DIFFRACTION

Resolution

7.81 Å

Loop

Sequence

GG*CCC

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4KZX_030 not in the Motif Atlas

Geometric match to IL_5J7L_044

Geometric discrepancy: 0.3378

The information below is about IL_5J7L_044

Detailed Annotation

Single stack bend

Broad Annotation

No text annotation

Motif group

IL_26793.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

16

Unit IDs

4KZX|1|i|G|524
4KZX|1|i|G|525
*
4KZX|1|i|C|538
4KZX|1|i|C|539
4KZX|1|i|C|540

Current chains

Chain i

18S ribosomal RNA

Nearby chains

Chain J

40S Ribosomal protein S9

Chain e

40S ribosomal protein S30