IL_4KZX_042
3D structure
- PDB id
- 4KZX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 40S ribosomal subunit in complex with eIF1.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 7.81 Å
Loop
- Sequence
- AC*GAAU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4KZX_042 not in the Motif Atlas
- Homologous match to IL_4V88_423
- Geometric discrepancy: 0.2407
- The information below is about IL_4V88_423
- Detailed Annotation
- Major groove minor groove platform; mini C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_68140.1
- Basepair signature
- cWW-cSH-cWW
- Number of instances in this motif group
- 19
Unit IDs
4KZX|1|i|A|798
4KZX|1|i|C|799
*
4KZX|1|i|G|856
4KZX|1|i|A|857
4KZX|1|i|A|858
4KZX|1|i|U|859
Current chains
- Chain i
- 18S ribosomal RNA
Nearby chains
- Chain H
- 40S ribosomal protein S7
- Chain L
- 40S ribosomal protein S11
- Chain W
- 40S ribosomal protein S15A
- Chain X
- 40S ribosomal protein S23
Coloring options: