IL_4KZX_092

3D structure

PDB id

4KZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 40S ribosomal subunit in complex with eIF1.

Experimental method

X-RAY DIFFRACTION

Resolution

7.81 Å

Loop

Sequence

GCCC*GUAAC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4KZX_092 not in the Motif Atlas

Homologous match to IL_8C3A_471

Geometric discrepancy: 0.4471

The information below is about IL_8C3A_471

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_65718.2

Basepair signature

cWW-cSH-cWS-cWW-cWW

Number of instances in this motif group

6

Unit IDs

4KZX|1|i|G|1697
4KZX|1|i|C|1698
4KZX|1|i|C|1699
4KZX|1|i|C|1700
*
4KZX|1|i|G|1823
4KZX|1|i|U|1824
4KZX|1|i|A|1825
4KZX|1|i|A|1826
4KZX|1|i|C|1827

Current chains

Chain i

18S ribosomal RNA

Nearby chains

Chain O

40S ribosomal protein S14

Chain l

Eukaryotic translation initiation factor 1