IL_4KZX_104

3D structure

PDB id

4KZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 40S ribosomal subunit in complex with eIF1.

Experimental method

X-RAY DIFFRACTION

Resolution

7.81 Å

Loop

Sequence

CCC*GAGCG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4KZX_104 not in the Motif Atlas

Geometric match to IL_5TBW_064

Geometric discrepancy: 0.3758

The information below is about IL_5TBW_064

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_15698.1

Basepair signature

cWW-tSH-cSH-cWW

Number of instances in this motif group

9

Unit IDs

4KZX|1|i|C|1745
4KZX|1|i|C|1746
4KZX|1|i|C|1747
*
4KZX|1|i|G|1774
4KZX|1|i|A|1775
4KZX|1|i|G|1776
4KZX|1|i|C|1777
4KZX|1|i|G|1778

Current chains

Chain i

18S ribosomal RNA

Nearby chains

Chain G

40S ribosomal protein S6