IL_4KZZ_007
3D structure
- PDB id
- 4KZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 40S ribosomal subunit in complex with mRNA, initiator tRNA and eIF1A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 7.03 Å
Loop
- Sequence
- UACGCA*UGAAA
- Length
- 11 nucleotides
- Bulged bases
- 4KZZ|1|i|C|65, 4KZZ|1|i|C|67
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4KZZ_007 not in the Motif Atlas
- Homologous match to IL_4V88_390
- Geometric discrepancy: 0.2006
- The information below is about IL_4V88_390
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_87517.1
- Basepair signature
- cWW-L-R-L-R-tHS-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
4KZZ|1|i|U|63
4KZZ|1|i|A|64
4KZZ|1|i|C|65
4KZZ|1|i|G|66
4KZZ|1|i|C|67
4KZZ|1|i|A|68
*
4KZZ|1|i|U|81
4KZZ|1|i|G|82
4KZZ|1|i|A|83
4KZZ|1|i|A|84
4KZZ|1|i|A|85
Current chains
- Chain i
- 18S Ribosomal RNA
Nearby chains
- Chain G
- 40S Ribosomal Protein S6
- Chain Y
- 40S Ribosomal Protein S24
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