IL_4KZZ_012
3D structure
- PDB id
- 4KZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 40S ribosomal subunit in complex with mRNA, initiator tRNA and eIF1A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 7.03 Å
Loop
- Sequence
- GGAUAAC*GCUAAUAC
- Length
- 15 nucleotides
- Bulged bases
- 4KZZ|1|i|U|172
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4KZZ_012 not in the Motif Atlas
- Homologous match to IL_4V88_394
- Geometric discrepancy: 0.1789
- The information below is about IL_4V88_394
- Detailed Annotation
- tWH-tWH-tHW-tHW
- Broad Annotation
- No text annotation
- Motif group
- IL_80604.3
- Basepair signature
- cWW-cWW-tWH-tWH-tHW-L-R-cWW
- Number of instances in this motif group
- 4
Unit IDs
4KZZ|1|i|G|145
4KZZ|1|i|G|146
4KZZ|1|i|A|147
4KZZ|1|i|U|148
4KZZ|1|i|A|149
4KZZ|1|i|A|150
4KZZ|1|i|C|151
*
4KZZ|1|i|G|167
4KZZ|1|i|C|168
4KZZ|1|i|U|169
4KZZ|1|i|A|170
4KZZ|1|i|A|171
4KZZ|1|i|U|172
4KZZ|1|i|A|173
4KZZ|1|i|C|174
Current chains
- Chain i
- 18S Ribosomal RNA
Nearby chains
- Chain G
- 40S Ribosomal Protein S6
- Chain Y
- 40S Ribosomal Protein S24
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