IL_4KZZ_044
3D structure
- PDB id
- 4KZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 40S ribosomal subunit in complex with mRNA, initiator tRNA and eIF1A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 7.03 Å
Loop
- Sequence
- UUUG*CUAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4KZZ_044 not in the Motif Atlas
- Geometric match to IL_7A0S_040
- Geometric discrepancy: 0.1928
- The information below is about IL_7A0S_040
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_71194.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
4KZZ|1|i|U|800
4KZZ|1|i|U|801
4KZZ|1|i|U|802
4KZZ|1|i|G|803
*
4KZZ|1|i|C|852
4KZZ|1|i|U|853
4KZZ|1|i|A|854
4KZZ|1|i|G|855
Current chains
- Chain i
- 18S Ribosomal RNA
Nearby chains
- Chain E
- 40S Ribosomal Protein S4X
- Chain H
- 40S Ribosomal Protein S7
- Chain L
- 40S Ribosomal Protein S11
- Chain W
- 40S Ribosomal Protein S15A
Coloring options: