IL_4KZZ_059
3D structure
- PDB id
- 4KZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 40S ribosomal subunit in complex with mRNA, initiator tRNA and eIF1A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 7.03 Å
Loop
- Sequence
- CGAU*GCAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4KZZ_059 not in the Motif Atlas
- Geometric match to IL_4V88_438
- Geometric discrepancy: 0.1534
- The information below is about IL_4V88_438
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_67085.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 55
Unit IDs
4KZZ|1|i|C|1094
4KZZ|1|i|G|1095
4KZZ|1|i|A|1096
4KZZ|1|i|U|1097
*
4KZZ|1|i|G|1127
4KZZ|1|i|C|1128
4KZZ|1|i|A|1129
4KZZ|1|i|G|1130
Current chains
- Chain i
- 18S Ribosomal RNA
Nearby chains
- Chain A
- 40S Ribosomal Protein SA
- Chain B
- 40S Ribosomal Protein S3A
- Chain N
- 40S Ribosomal Protein S13
- Chain R
- 40S Ribosomal Protein S17
- Chain a
- 40S Ribosomal Protein S26
Coloring options: