IL_4KZZ_077
3D structure
- PDB id
- 4KZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 40S ribosomal subunit in complex with mRNA, initiator tRNA and eIF1A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 7.03 Å
Loop
- Sequence
- CG*CAG
- Length
- 5 nucleotides
- Bulged bases
- 4KZZ|1|i|A|1485
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4KZZ_077 not in the Motif Atlas
- Homologous match to IL_4V88_452
- Geometric discrepancy: 0.1913
- The information below is about IL_4V88_452
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 127
Unit IDs
4KZZ|1|i|C|1333
4KZZ|1|i|G|1334
*
4KZZ|1|i|C|1484
4KZZ|1|i|A|1485
4KZZ|1|i|G|1486
Current chains
- Chain i
- 18S Ribosomal RNA
Nearby chains
- Chain C
- 40S Ribosomal Protein S2
- Chain D
- 40S Ribosomal Protein S3
- Chain U
- 40S Ribosomal Protein S20
- Chain d
- 40S Ribosomal Protein S29
- Chain k
- mRNA
Coloring options: