IL_4L47_181

3D structure

PDB id

4L47 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

GACAAC*GCUAAUC

Length

13 nucleotides

Bulged bases

4L47|1|XA|U|173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4L47_181 not in the Motif Atlas

Homologous match to IL_4LFB_009

Geometric discrepancy: 0.1165

The information below is about IL_4LFB_009

Detailed Annotation

tWH-tWH-tHW-tHW

Broad Annotation

No text annotation

Motif group

IL_12745.1

Basepair signature

cWW-tWH-tWH-tHW-tHW-cWW

Number of instances in this motif group

1

Unit IDs

4L47|1|XA|G|148
4L47|1|XA|A|149
4L47|1|XA|C|150
4L47|1|XA|A|151
4L47|1|XA|A|152
4L47|1|XA|C|153
*
4L47|1|XA|G|168
4L47|1|XA|C|169
4L47|1|XA|U|170
4L47|1|XA|A|171
4L47|1|XA|A|172
4L47|1|XA|U|173
4L47|1|XA|C|174

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XT

30S ribosomal protein S20