IL_4L47_293

3D structure

PDB id

4L47 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

UG*CAACAAG

Length

9 nucleotides

Bulged bases

4L47|1|YA|A|1510

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4L47_293 not in the Motif Atlas

Homologous match to IL_7RQB_061

Geometric discrepancy: 0.4297

The information below is about IL_7RQB_061

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_52493.1

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

2

Unit IDs

4L47|1|YA|U|1482
4L47|1|YA|G|1483
*
4L47|1|YA|C|1506
4L47|1|YA|A|1507
4L47|1|YA|A|1508
4L47|1|YA|C|1509
4L47|1|YA|A|1510
4L47|1|YA|A|1511
4L47|1|YA|G|1512

Current chains

Chain YA

23S rRNA

Nearby chains