IL_4L71_037

3D structure

PDB id

4L71 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.9 Å

Loop

Sequence

GCAC*GUUCCC

Length

10 nucleotides

Bulged bases

4L71|1|QA|C|934

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4L71_037 not in the Motif Atlas

Geometric match to IL_6CZR_149

Geometric discrepancy: 0.1717

The information below is about IL_6CZR_149

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_93211.1

Basepair signature

cWW-cWS-cWW-L-R-cWW-L

Number of instances in this motif group

2

Unit IDs

4L71|1|QA|G|933
4L71|1|QA|C|934
4L71|1|QA|A|935
4L71|1|QA|C|936
*
4L71|1|QA|G|1379
4L71|1|QA|U|1380
4L71|1|QA|U|1381
4L71|1|QA|C|1382
4L71|1|QA|C|1383
4L71|1|QA|C|1384

Current chains

Chain QA

16S Ribosomal RNA

Nearby chains

Chain QG

30S ribosomal protein S7

Chain QI

30S ribosomal protein S9

Chain QV

Transfer RNA; tRNA