IL_4L71_104

3D structure

PDB id

4L71 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.9 Å

Loop

Sequence

CGAUGAAG*UGGAG

Length

13 nucleotides

Bulged bases

4L71|1|RA|U|1211

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4L71_104 not in the Motif Atlas

Homologous match to IL_7RQB_047

Geometric discrepancy: 0.1221

The information below is about IL_7RQB_047

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_70923.2

Basepair signature

cWW-tSS-tSH-L-tHS-tHS-cWW

Number of instances in this motif group

28

Unit IDs

4L71|1|RA|C|1208
4L71|1|RA|G|1209
4L71|1|RA|A|1210
4L71|1|RA|U|1211
4L71|1|RA|G|1212
4L71|1|RA|A|1213
4L71|1|RA|A|1214
4L71|1|RA|G|1215
*
4L71|1|RA|U|1234
4L71|1|RA|G|1235
4L71|1|RA|G|1236
4L71|1|RA|A|1237
4L71|1|RA|G|1238

Current chains

Chain RA

23S Ribosomal RNA

Nearby chains

Chain RU

50S ribosomal protein L20