IL_4L71_109

3D structure

PDB id

4L71 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.9 Å

Loop

Sequence

CUAAG*CGAAG

Length

10 nucleotides

Bulged bases

4L71|1|RA|A|1379

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4L71_109 not in the Motif Atlas

Homologous match to IL_7RQB_052

Geometric discrepancy: 0.0901

The information below is about IL_7RQB_052

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_89002.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

20

Unit IDs

4L71|1|RA|C|1351
4L71|1|RA|U|1352
4L71|1|RA|A|1353
4L71|1|RA|A|1354
4L71|1|RA|G|1355
*
4L71|1|RA|C|1376
4L71|1|RA|G|1377
4L71|1|RA|A|1378
4L71|1|RA|A|1379
4L71|1|RA|G|1380

Current chains

Chain RA

23S Ribosomal RNA

Nearby chains

Chain R7

50S ribosomal protein L34

Chain RD

50S ribosomal protein L2