IL_4L71_131

3D structure

PDB id

4L71 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.9 Å

Loop

Sequence

UCAAG*CGAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4L71_131 not in the Motif Atlas

Homologous match to IL_7RQB_074

Geometric discrepancy: 0.1322

The information below is about IL_7RQB_074

Detailed Annotation

UAA/GAN with extra pair

Broad Annotation

No text annotation

Motif group

IL_90318.1

Basepair signature

cWW-tSH-L-R-L-R-cWW

Number of instances in this motif group

3

Unit IDs

4L71|1|RA|U|1851
4L71|1|RA|C|1852
4L71|1|RA|A|1853
4L71|1|RA|A|1854
4L71|1|RA|G|1855
*
4L71|1|RA|C|1887
4L71|1|RA|G|1888
4L71|1|RA|A|1889
4L71|1|RA|A|1890
4L71|1|RA|G|1891

Current chains

Chain RA

23S Ribosomal RNA

Nearby chains

Chain RD

50S ribosomal protein L2