IL_4L71_191

3D structure

PDB id

4L71 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.9 Å

Loop

Sequence

GAAACC*GACUGAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4L71_191 not in the Motif Atlas

Homologous match to IL_4LFB_019

Geometric discrepancy: 0.1265

The information below is about IL_4LFB_019

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_31561.1

Basepair signature

cWW-L-R-tWH-tWH-L-R-L-cWW

Number of instances in this motif group

1

Unit IDs

4L71|1|XA|G|450
4L71|1|XA|A|451
4L71|1|XA|A|452
4L71|1|XA|A|453
4L71|1|XA|C|454
4L71|1|XA|C|455
*
4L71|1|XA|G|477
4L71|1|XA|A|478
4L71|1|XA|C|479
4L71|1|XA|U|480
4L71|1|XA|G|481
4L71|1|XA|A|482
4L71|1|XA|C|483

Current chains

Chain XA

16S Ribosomal RNA

Nearby chains

Chain XP

30S ribosomal protein S16