IL_4L71_223

3D structure

PDB id

4L71 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.9 Å

Loop

Sequence

CCG*CAAG

Length

7 nucleotides

Bulged bases

4L71|1|XA|C|1400, 4L71|1|XA|A|1503

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4L71_223 not in the Motif Atlas

Geometric match to IL_4V88_463

Geometric discrepancy: 0.2268

The information below is about IL_4V88_463

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61438.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

5

Unit IDs

4L71|1|XA|C|1399
4L71|1|XA|C|1400
4L71|1|XA|G|1401
*
4L71|1|XA|C|1501
4L71|1|XA|A|1502
4L71|1|XA|A|1503
4L71|1|XA|G|1504

Current chains

Chain XA

16S Ribosomal RNA

Nearby chains

Chain XK

30S ribosomal protein S11

Chain XV

Transfer RNA; tRNA

Chain XX

A-site ASL SufA6