3D structure

PDB id
4L71 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.9 Å

Loop

Sequence
CGCUGAC*GGUGGAG
Length
14 nucleotides
Bulged bases
4L71|1|RA|G|932
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4L71_350 not in the Motif Atlas
Homologous match to IL_9DFE_024
Geometric discrepancy: 0.2622
The information below is about IL_9DFE_024
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_68243.1
Basepair signature
cWW-L-cWW-cWW-R-L-tHS-cWW
Number of instances in this motif group
1

Unit IDs

4L71|1|RA|C|844
4L71|1|RA|G|845
4L71|1|RA|C|846
4L71|1|RA|U|847
4L71|1|RA|G|848
4L71|1|RA|A|849
4L71|1|RA|C|850
*
4L71|1|RA|G|928
4L71|1|RA|G|929
4L71|1|RA|U|930
4L71|1|RA|G|931
4L71|1|RA|G|932
4L71|1|RA|A|933
4L71|1|RA|G|934

Current chains

Chain RA
23S Ribosomal RNA

Nearby chains

Chain R3
50S ribosomal protein L30

Coloring options:


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