3D structure

PDB id
4LEL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.9 Å

Loop

Sequence
GAGUAG*CGCAGAUAC
Length
15 nucleotides
Bulged bases
4LEL|1|QA|A|702
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4LEL_031 not in the Motif Atlas
Homologous match to IL_4LFB_031
Geometric discrepancy: 0.117
The information below is about IL_4LFB_031
Detailed Annotation
Kink-turn
Broad Annotation
No text annotation
Motif group
IL_95727.1
Basepair signature
cWW-L-tSH-L-tHW-tHS-R-cWW-L
Number of instances in this motif group
1

Unit IDs

4LEL|1|QA|G|683
4LEL|1|QA|A|684
4LEL|1|QA|G|685
4LEL|1|QA|U|686
4LEL|1|QA|A|687
4LEL|1|QA|G|688
*
4LEL|1|QA|C|699
4LEL|1|QA|G|700
4LEL|1|QA|C|701
4LEL|1|QA|A|702
4LEL|1|QA|G|703
4LEL|1|QA|A|704
4LEL|1|QA|U|705
4LEL|1|QA|A|706
4LEL|1|QA|C|707

Current chains

Chain QA
16S rRNA

Nearby chains

Chain QK
30S ribosomal protein S11
Chain RA
Large subunit ribosomal RNA; LSU rRNA

Coloring options:


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