IL_4LEL_151

3D structure

PDB id

4LEL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.9 Å

Loop

Sequence

CCGAG*CGGCG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4LEL_151 not in the Motif Atlas

Homologous match to IL_7A0S_087

Geometric discrepancy: 0.2061

The information below is about IL_7A0S_087

Detailed Annotation

Double sheared with non-canonical cWW

Broad Annotation

Double sheared

Motif group

IL_87767.1

Basepair signature

cWW-L-R-tSH-tHS-cWW

Number of instances in this motif group

16

Unit IDs

4LEL|1|RA|C|2466
4LEL|1|RA|C|2467
4LEL|1|RA|G|2468
4LEL|1|RA|A|2469
4LEL|1|RA|G|2470
*
4LEL|1|RA|C|2480
4LEL|1|RA|G|2481
4LEL|1|RA|G|2482
4LEL|1|RA|C|2483
4LEL|1|RA|G|2484

Current chains

Chain RA

23S rRNA

Nearby chains

Chain R9

50S ribosomal protein L36

Chain RQ

50S ribosomal protein L16