3D structure

PDB id
4LEL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.9 Å

Loop

Sequence
GAUG*CUAAUC
Length
10 nucleotides
Bulged bases
4LEL|1|XA|U|1257, 4LEL|1|XA|A|1280, 4LEL|1|XA|U|1281
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4LEL_217 not in the Motif Atlas
Homologous match to IL_4LFB_052
Geometric discrepancy: 0.151
The information below is about IL_4LFB_052
Detailed Annotation
180 degree turn
Broad Annotation
No text annotation
Motif group
IL_11344.2
Basepair signature
cWW-cSS-L-cWW
Number of instances in this motif group
2

Unit IDs

4LEL|1|XA|G|1255
4LEL|1|XA|A|1256
4LEL|1|XA|U|1257
4LEL|1|XA|G|1258
*
4LEL|1|XA|C|1277
4LEL|1|XA|U|1278
4LEL|1|XA|A|1279
4LEL|1|XA|A|1280
4LEL|1|XA|U|1281
4LEL|1|XA|C|1282

Current chains

Chain XA
16S rRNA

Nearby chains

Chain XC
30S ribosomal protein S3
Chain XJ
30S ribosomal protein S10
Chain XN
30S ribosomal protein S14

Coloring options:


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