3D structure

PDB id
4LEL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.9 Å

Loop

Sequence
CGAAGACAG*UCGAG
Length
14 nucleotides
Bulged bases
4LEL|1|YA|A|1046
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4LEL_271 not in the Motif Atlas
Homologous match to IL_5J7L_284
Geometric discrepancy: 0.2514
The information below is about IL_5J7L_284
Detailed Annotation
Kink-turn
Broad Annotation
No text annotation
Motif group
IL_99692.2
Basepair signature
cWW-tSS-tSH-L-R-R-L-cWW-L-L
Number of instances in this motif group
6

Unit IDs

4LEL|1|YA|C|1043
4LEL|1|YA|G|1044
4LEL|1|YA|A|1045
4LEL|1|YA|A|1046
4LEL|1|YA|G|1047
4LEL|1|YA|A|1048
4LEL|1|YA|C|1049
4LEL|1|YA|A|1050
4LEL|1|YA|G|1051
*
4LEL|1|YA|U|1108
4LEL|1|YA|C|1109
4LEL|1|YA|G|1110
4LEL|1|YA|A|1111
4LEL|1|YA|G|1112

Current chains

Chain YA
23S rRNA

Nearby chains

Chain Y9
50S ribosomal protein L36
Chain YH
50S ribosomal protein L6

Coloring options:


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