IL_4LEL_276

3D structure

PDB id

4LEL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.9 Å

Loop

Sequence

CGAUGAAG*UGGAG

Length

13 nucleotides

Bulged bases

4LEL|1|YA|U|1211

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4LEL_276 not in the Motif Atlas

Homologous match to IL_7RQB_047

Geometric discrepancy: 0.1331

The information below is about IL_7RQB_047

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_70923.2

Basepair signature

cWW-tSS-tSH-L-tHS-tHS-cWW

Number of instances in this motif group

28

Unit IDs

4LEL|1|YA|C|1208
4LEL|1|YA|G|1209
4LEL|1|YA|A|1210
4LEL|1|YA|U|1211
4LEL|1|YA|G|1212
4LEL|1|YA|A|1213
4LEL|1|YA|A|1214
4LEL|1|YA|G|1215
*
4LEL|1|YA|U|1234
4LEL|1|YA|G|1235
4LEL|1|YA|G|1236
4LEL|1|YA|A|1237
4LEL|1|YA|G|1238

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YU

50S ribosomal protein L20