IL_4LFB_055

3D structure

PDB id

4LFB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of 30S ribosomal subunit from Thermus thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.01 Å

Loop

Sequence

CGGAUU*AUGAAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_85536.1

Basepair signature

cWW-tSH-L-R-L-R-cWW-cWW

Number of instances in this motif group

7

Unit IDs

4LFB|1|A|C|1303
4LFB|1|A|G|1304
4LFB|1|A|G|1305
4LFB|1|A|A|1306
4LFB|1|A|U|1307
4LFB|1|A|U|1308
*
4LFB|1|A|A|1329
4LFB|1|A|U|1330
4LFB|1|A|G|1331
4LFB|1|A|A|1332
4LFB|1|A|A|1333
4LFB|1|A|G|1334

Current chains

Chain A

16S rRNA

Nearby chains

Chain M

ribosomal protein S13

Chain S

ribosomal protein S19

Chain U

ribosomal protein THX