IL_4LFC_062

3D structure

PDB id

4LFC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of 30S ribosomal subunit from Thermus thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CGGGAG*CAG

Length

9 nucleotides

Bulged bases

4LFC|1|A|G|1443

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4LFC_062 not in the Motif Atlas

Homologous match to IL_4LFB_064

Geometric discrepancy: 0.1262

The information below is about IL_4LFB_064

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_49061.1

Basepair signature

cWW-L-R-L-cWW-L

Number of instances in this motif group

6

Unit IDs

4LFC|1|A|C|1440
4LFC|1|A|G|1441
4LFC|1|A|G|1442
4LFC|1|A|G|1443
4LFC|1|A|A|1446
4LFC|1|A|G|1447
*
4LFC|1|A|C|1459
4LFC|1|A|A|1460
4LFC|1|A|G|1461

Current chains

Chain A

16S rRNA

Nearby chains

Chain T

ribosomal protein S20