IL_4LFZ_079
3D structure
- PDB id
- 4LFZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of Paromomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.92 Å
Loop
- Sequence
- GGA*UAACC
- Length
- 8 nucleotides
- Bulged bases
- 4LFZ|1|RA|G|776, 4LFZ|1|RA|A|788, 4LFZ|1|RA|A|789, 4LFZ|1|RA|C|790
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4LFZ_079 not in the Motif Atlas
- Homologous match to IL_4WF9_027
- Geometric discrepancy: 0.1211
- The information below is about IL_4WF9_027
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_89509.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 9
Unit IDs
4LFZ|1|RA|G|775
4LFZ|1|RA|G|776
4LFZ|1|RA|A|777
*
4LFZ|1|RA|U|787
4LFZ|1|RA|A|788
4LFZ|1|RA|A|789
4LFZ|1|RA|C|790
4LFZ|1|RA|C|791
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain R7
- 50S ribosomal protein L34
- Chain RD
- 50S ribosomal protein L2
- Chain RF
- 50S ribosomal protein L4
- Chain RW
- 50S ribosomal protein L22
Coloring options: