IL_4LFZ_282

3D structure

PDB id

4LFZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of Paromomycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.92 Å

Loop

Sequence

CGAUG*CUAAG

Length

10 nucleotides

Bulged bases

4LFZ|1|YA|U|1420

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4LFZ_282 not in the Motif Atlas

Homologous match to IL_7RQB_055

Geometric discrepancy: 0.1304

The information below is about IL_7RQB_055

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_89002.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

20

Unit IDs

4LFZ|1|YA|C|1417
4LFZ|1|YA|G|1418
4LFZ|1|YA|A|1419
4LFZ|1|YA|U|1420
4LFZ|1|YA|G|1421
*
4LFZ|1|YA|C|1577
4LFZ|1|YA|U|1578
4LFZ|1|YA|A|1579
4LFZ|1|YA|A|1580
4LFZ|1|YA|G|1581

Current chains

Chain YA

23S rRNA

Nearby chains