IL_4LNT_080

3D structure

PDB id

4LNT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

2.94 Å

Loop

Sequence

UGAAG*UGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4LNT_080 not in the Motif Atlas

Homologous match to IL_7RQB_021

Geometric discrepancy: 0.0514

The information below is about IL_7RQB_021

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_56467.8

Basepair signature

cWW-tSH-tSH-tHS-cWW

Number of instances in this motif group

29

Unit IDs

4LNT|1|RA|U|703
4LNT|1|RA|G|704
4LNT|1|RA|A|705
4LNT|1|RA|A|706
4LNT|1|RA|G|707
*
4LNT|1|RA|U|724
4LNT|1|RA|G|725
4LNT|1|RA|G|726
4LNT|1|RA|A|727
4LNT|1|RA|G|728

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RD

50S ribosomal protein L2