IL_4LNT_161

3D structure

PDB id

4LNT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

2.94 Å

Loop

Sequence

CCUCU*AUG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4LNT_161 not in the Motif Atlas

Homologous match to IL_7RQB_104

Geometric discrepancy: 0.0684

The information below is about IL_7RQB_104

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_63596.6

Basepair signature

cWW-cWS-cSH-tWH-cWW-L

Number of instances in this motif group

14

Unit IDs

4LNT|1|RA|C|2680
4LNT|1|RA|C|2681
4LNT|1|RA|U|2682
4LNT|1|RA|C|2683
4LNT|1|RA|U|2684
*
4LNT|1|RA|A|2725
4LNT|1|RA|U|2726
4LNT|1|RA|G|2727

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RE

50S ribosomal protein L3

Chain RO

50S ribosomal protein L14

Chain RT

50S ribosomal protein L19