IL_4LNT_268

3D structure

PDB id

4LNT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

2.94 Å

Loop

Sequence

CCA*UG

Length

5 nucleotides

Bulged bases

4LNT|1|YA|C|995

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4LNT_268 not in the Motif Atlas

Homologous match to IL_7RQB_035

Geometric discrepancy: 0.0638

The information below is about IL_7RQB_035

Detailed Annotation

Single bulged C

Broad Annotation

No text annotation

Motif group

IL_61258.12

Basepair signature

cWW-L-cWW

Number of instances in this motif group

40

Unit IDs

4LNT|1|YA|C|994
4LNT|1|YA|C|995
4LNT|1|YA|A|996
*
4LNT|1|YA|U|1159
4LNT|1|YA|G|1160

Current chains

Chain YA

23S rRNA

Nearby chains

Chain Y3

50S ribosomal protein L30

Chain YN

50S ribosomal protein L13

Chain YU

50S ribosomal protein L20

Chain YV

50S ribosomal protein L21