IL_4LNT_339

3D structure

PDB id

4LNT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

2.94 Å

Loop

Sequence

UGUAAG*UUGAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4LNT_339 not in the Motif Atlas

Homologous match to IL_7RQB_110

Geometric discrepancy: 0.0832

The information below is about IL_7RQB_110

Detailed Annotation

tHS double platform

Broad Annotation

No text annotation

Motif group

IL_83162.5

Basepair signature

cWW-tSH-L-tHH-L-cWW

Number of instances in this motif group

7

Unit IDs

4LNT|1|YA|U|2847
4LNT|1|YA|G|2848
4LNT|1|YA|U|2849
4LNT|1|YA|A|2850
4LNT|1|YA|A|2851
4LNT|1|YA|G|2852
*
4LNT|1|YA|U|2865
4LNT|1|YA|U|2866
4LNT|1|YA|G|2867
4LNT|1|YA|A|2868
4LNT|1|YA|G|2869

Current chains

Chain YA

23S rRNA

Nearby chains

Chain XA

Small subunit ribosomal RNA; SSU rRNA

Chain YR

50S ribosomal protein L17

Chain YT

50S ribosomal protein L19