IL_4LSK_155

3D structure

PDB id

4LSK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.48 Å

Loop

Sequence

CG*CACG

Length

6 nucleotides

Bulged bases

4LSK|1|RA|A|2572, 4LSK|1|RA|C|2573

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4LSK_155 not in the Motif Atlas

Homologous match to IL_4WF9_096

Geometric discrepancy: 0.1186

The information below is about IL_4WF9_096

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_42626.2

Basepair signature

cWW-cWW

Number of instances in this motif group

14

Unit IDs

4LSK|1|RA|C|2512
4LSK|1|RA|G|2513
*
4LSK|1|RA|C|2571
4LSK|1|RA|A|2572
4LSK|1|RA|C|2573
4LSK|1|RA|G|2574

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RE

50S ribosomal protein L3

Chain RN

50S ribosomal protein L13

Chain Z6

tRNA acceptor end mimic