IL_4LSK_356

3D structure

PDB id

4LSK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.48 Å

Loop

Sequence

GGAACUCUG*CUGUC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4LSK_356 not in the Motif Atlas

Homologous match to IL_9DFE_066

Geometric discrepancy: 0.0962

The information below is about IL_9DFE_066

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_22854.4

Basepair signature

cWW-tSH-cWW-tHW-R-L-cWW-L-L-R

Number of instances in this motif group

7

Unit IDs

4LSK|1|RA|G|1666
4LSK|1|RA|G|1667
4LSK|1|RA|A|1668
4LSK|1|RA|A|1669
4LSK|1|RA|C|1670
4LSK|1|RA|U|1671
4LSK|1|RA|C|1672
4LSK|1|RA|U|1673
4LSK|1|RA|G|1674
*
4LSK|1|RA|C|1990
4LSK|1|RA|U|1991
4LSK|1|RA|G|1992
4LSK|1|RA|U|1993
4LSK|1|RA|C|1994

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RE

50S ribosomal protein L3

Chain RO

50S ribosomal protein L14